Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015873734.1_cds_XP_016435236.1_31220
CDS Infomation

[gene=LOC107761526] [db_xref=GeneID:107761526] [protein=trigger factor-like protein TIG, Chloroplastic] [protein_id=XP_016435236.1] [location=complement(join(79100..79130,79219..79292,79516..79611,80073..80222,80307..80387,80831..80923,81037..81129,81680..81834,81951..82041,82940..83123,83890..83978,84329..84457,84750..84833,85449..85748))] [gbkey=CDS]
Sequence

ATGGCAACGCCAATTGCAATCCAATTCAAGCCCTCTATTCTCTCCTTTCCATCACCTCAT
TCCCCATCTATTAACACAAAAACTCATTTCCTTCAACCCAATGATAAATTCTTGCTCTCT
TCTCCTCTCAAACAAATAGTACCCACTTTATCTTCCCGCCAATTCTCCTTTCTTCAACAG
CAGCAGCTTTCTTCAGCTCGTTTCGTAGCCTCAGCAGCTCCCGGCGTTGTTGATACTGTT
GATAAAGATAAACTTCCAGCTGATATTCATGTTACTGAAACCCAGGAACCCAATTCCAGA
GTCAGATTGACTGTAGAAGTTCCAACTGTTGTATGCGAGGATTGCTACGGAAGAGTCATA
AGAGAGTTCATGAAACACTCAAAGGTTCCTGGATTTCGTCCTGGGAAGAATGTTCCAGAA
GATATCCTCGTTGGCTATGTTGGGAAGCAAAATGTTCAAAAAGCTGCAGTCGAGTCTATT
CTGAAAAGAACACTTCCACATGCCATGTCTTCGGTTACTGGAAAAGCATTGGAAGACTCA
ATTCGCATTGCGACCAAATTCACAGACATGGAAAAGACCTATGTGTCTACGAATTCCTTG
AGGTATGATGTGATTGTTGATGTGGCTCCTGAAATCAAGTGGAAACCTGAAAATGCATAT
AAGAATCTTAAGGTTGTTGTTGAGCTTGACAGTGATATGGATGCTCAGGTAGCTTCAGAA
AAAGAATTTACACGGCGTCACAAGTCTCTGGGTGCATTGAAAATTGTTACTGATCGGGGT
TTACAGGTTGGCGATGTTGCAGTGATTGATATATCAGCAACTACGATTGAACAAGATGGA
TCAGATGCTAAAAGCATACCTGCTGCAGAGAGTAAAGGTTTCAACTTTGACACGGAAGAT
GGGGATAATGTCCTTCCCGGTTTTCTTGACTCAATTGTTGGTATTAAACGTGGTGAAACA
AAGTCATTCCCTTTGGTATTTCCAGACTCATGGAAACAAGAGGATCTTCGTGGTGTTCAT
GCTCAATTCACAGTTGAATGTAAAGAACTGTTCTACAGAGATTTGCCTGAGGTGAATGAC
TCGATTGCTGATAAGCTTATCCCGGGATGCAGCTCCATTGAGGAGGTAAAGCAAGCATTG
CTACAAAGATGTCTTGAAGTTGAACAGGCAGCTAAAGACCAAGCAACTGATAATGCTATC
TTAGACCAGCTATACAAGATGGTTGAAGTTGATATTCCTCAATCTCTCTTCGAAGAGCAA
GGAAGACAACTCTATGGAGCTCAACTTTTACAGTTGCAGGCAAATATGAAACTGAGCGAA
CAGCAGCTGGCATCGTTATCAAGCCCAAGGGCCGTGAATGAGTTCCTTGAAGCACAAAAA
GAAAATATAACAAGTATTATAAAGCAAAATTTAGCTGTTGGTGACATATTTACACGTGAA
AATTTGCAGTTTTCAACAGAGGAGCTAGTGAAAGAGGTTCAGAACTCAATTGAAGAATTC
CAAAAGTCTCAACAGGAGTACGATGAGGACCGAGTTAAGCAACAGGTACAAGAGGTACTT
GAAGGGGCTAAAGTACTTGAATGGCTAAGGGAAAATGCAGATATTCAGTACATAACTAGC
ACCATGCATGGTGTTGATGGTCCCAGATGA

Peptide Sequence

PEP ID

XP_016435236.1
PEP Infomation

PREDICTED: trigger factor-like protein TIG, Chloroplastic [Nicotiana tabacum]
Sequence

MATPIAIQFKPSILSFPSPHSPSINTKTHFLQPNDKFLLSSPLKQIVPTLSSRQFSFLQQ
QQLSSARFVASAAPGVVDTVDKDKLPADIHVTETQEPNSRVRLTVEVPTVVCEDCYGRVI
REFMKHSKVPGFRPGKNVPEDILVGYVGKQNVQKAAVESILKRTLPHAMSSVTGKALEDS
IRIATKFTDMEKTYVSTNSLRYDVIVDVAPEIKWKPENAYKNLKVVVELDSDMDAQVASE
KEFTRRHKSLGALKIVTDRGLQVGDVAVIDISATTIEQDGSDAKSIPAAESKGFNFDTED
GDNVLPGFLDSIVGIKRGETKSFPLVFPDSWKQEDLRGVHAQFTVECKELFYRDLPEVND
SIADKLIPGCSSIEEVKQALLQRCLEVEQAAKDQATDNAILDQLYKMVEVDIPQSLFEEQ
GRQLYGAQLLQLQANMKLSEQQLASLSSPRAVNEFLEAQKENITSIIKQNLAVGDIFTRE
NLQFSTEELVKEVQNSIEEFQKSQQEYDEDRVKQQVQEVLEGAKVLEWLRENADIQYITS
TMHGVDGPR

Transcript Sequence

Gene sequence data has not been registered.